Table 1. Three structures of MMP-1 (PDB: 966C), MMP-3 (PDB: 1G4K) and MMP-9 (PDB: 2OW0) as targets for anti-aging drug discovery

Protein PDB id Resolution Structure type Selected chain for docking Co-crystallized ligand Reference
MMP-1 966C 1.9 Å Monomer A Monomer A N-hydroxy-2-[4-(4-phenoxy-benzenesulfonyl)-tetrahydro-pyran-4-yl]-acetamide [11]
MMP-3 1G4K 2.0 Å Trimer A, B, C Chain B 5-methyl-5-(4-phenoxy-phenyl)-pyrimidine-2,4,6-trione [12]
MMP-9 2OW0 2,.0 Å Dimer A, B Chain A N-[(4’-iodobiphenyl-4-yl)sulfonyl]-d-tryptophan [13]